BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B01LP1|AL425323
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1897 0.0
>3x_Contig1313
Length = 8010
Score = 1897 bits (953), Expect = 0.0
Identities = 985/995 (98%), Gaps = 3/995 (0%)
Strand = Plus / Plus
Query: 1 gatcttgacgttgttcttcttagccttttcgaccaactttggaaccaattcggcaccagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5832 gatcttgacgttgttcttcttagccttttcgaccaactttggaaccaattcggcaccagc 5891
Query: 61 agcatcgtagatggagtcaccgatttcagtgttttccaagaccttcttgaaggtgaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5892 agcatcgtagatggagtcaccgatttcagtgttttccaagaccttcttgaaggtgaaagc 5951
Query: 121 cataccaccaccaatgatcaaagaatcgaccttgtccaacaaattgtcgatcaattgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5952 cataccaccaccaatgatcaaagaatcgaccttgtccaacaaattgtcgatcaattgaat 6011
Query: 181 cttgtctgccaccttagcaccacccaagatagccaagaatggtctggttgggttttccaa 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6012 cttgtctgcaaccttagcaccacccaagatagccaagaatggtctggttgggttttccaa 6071
Query: 241 agccttagcaaagtattgcmattccttggacaacaagaaaccggcagctctgtttggcaa 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6072 agccttagcaaagtattgcaattccttggacaacaagaaaccggcagctctgtttggcaa 6131
Query: 301 gtcgaaaccgacaatggaagagtgagcyctgtgagcgggtaccgaag-catcgttaacgt 359
||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 6132 gtcgaaaccgacaatggaagagtgagctctgtgagcgg-taccgaaggcatcgttaacgt 6190
Query: 360 aaacatcggccaaagaactcaattgttctctgaatttggtaacagcagccttgtcagcct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6191 aaacatcggccaaagaactcaattgttctctgaatttggtaacagcagccttgtcagcct 6250
Query: 420 taaccttgttaccatccacctttctggaaccttcttcttcgatgtggaatctcaagtttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6251 taaccttgttaccatccacctttctggaaccttcttcttcgatgtggaatctcaagtttt 6310
Query: 480 ccaataggaaaacttcaccgtccttagcgttgttaacggcattggtgacttcttcaccaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6311 ccaataggaaaacttcaccgtccttagcgttgttaacggcattggtgacttcttcaccaa 6370
Query: 540 cacagtcatgcaagamagtaactggcttttgcmatagtctagacaattcatcggcaactg 599
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6371 cacagtcatgcaagaaagtaactggcttttgcaatagtctagacaattcatcggcaactg 6430
Query: 600 gagccaatgagtatttgtcgttaacttcaccgtttggtctacccaaatgagaggccaaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6431 gagccaatgagtatttgtcgttaacttcaccgtttggtctacccaaatgagaggccaaga 6490
Query: 660 caatggcctttggcttcttttccaaaacgtattgaatagtaggcagagctgctacaattc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491 caatggcctttggcttcttttccaaaacgtattgaatagtaggcagagctgctacaattc 6550
Query: 720 tttggttggaagtgatcttcttaccgtccaatgggacgttgaaatcaactctgatgaaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6551 tttggttggaagtgatcttcttaccgtccaatgggacgttgaaatcaactctgatgaaca 6610
Query: 780 ctcttttaccagtgacatccaaatccttgacagtbaattttgaactcaaagacattttta 839
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6611 ctcttttaccagtgacatccaaatccttgacagtcaattttgaactcaaagacattttta 6670
Query: 840 ttaattcttgatcgatttttttgttatttctgaagtaactcttaatgtagcaacagatat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6671 ttaattcttgatcgatttttttgttatttctgaagtaactcttaatgtagcaacagatat 6730
Query: 900 atttaaatattgttgatggtttaggatgacaaaaagatgaaattaataaccaattgagtt 959
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6731 atttaaatattgttgatggtttaggatgacaaaaagatgaaaataataaccaattgagtt 6790
Query: 960 gaatagattgataatgaatagc-actattgaaaaa 993
|||||||||||||||||||||| ||||||||||||
Sbjct: 6791 gaatagattgataatgaatagcaactattgaaaaa 6825
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8687
Number of Sequences: 1807
Number of extensions: 8687
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)